|
|
@@ -16,6 +16,8 @@ Clicking ignore will prevent this warning from showing
|
|
16
|
16
|
each time you launch Akvo.
|
|
17
|
17
|
"""
|
|
18
|
18
|
|
|
|
19
|
+from akvo.gui.addCircularLoop_ui import Ui_circularLoopAdd
|
|
|
20
|
+
|
|
19
|
21
|
import matplotlib
|
|
20
|
22
|
matplotlib.use("QT5Agg")
|
|
21
|
23
|
from PyQt5 import QtCore, QtGui, QtWidgets
|
|
|
@@ -34,6 +36,8 @@ from akvo.tressel import mrsurvey
|
|
34
|
36
|
import pkg_resources # part of setuptools
|
|
35
|
37
|
version = pkg_resources.require("Akvo")[0].version
|
|
36
|
38
|
|
|
|
39
|
+from collections import OrderedDict
|
|
|
40
|
+
|
|
37
|
41
|
from ruamel import yaml
|
|
38
|
42
|
#import ruamel.yaml
|
|
39
|
43
|
#yaml = ruamel.yaml.YAML()
|
|
|
@@ -59,16 +63,6 @@ class VectorXr(yaml.YAMLObject):
|
|
59
|
63
|
# Converts to numpy array on import
|
|
60
|
64
|
return "np.array(%r)" % (self.data)
|
|
61
|
65
|
|
|
62
|
|
-from collections import OrderedDict
|
|
63
|
|
-#def represent_ordereddict(dumper, data):
|
|
64
|
|
-# print("representing IN DA HOUSE!!!!!!!!!!!!!!!!!!!!!")
|
|
65
|
|
-# value = []
|
|
66
|
|
-# for item_key, item_value in data.items():
|
|
67
|
|
-# node_key = dumper.represent_data(item_key)
|
|
68
|
|
-# node_value = dumper.represent_data(item_value)
|
|
69
|
|
-# value.append((node_key, node_value))
|
|
70
|
|
-# return yaml.nodes.MappingNode(u'tag:yaml.org,2002:map', value)
|
|
71
|
|
-#yaml.add_representer(OrderedDict, represent_ordereddict)
|
|
72
|
66
|
|
|
73
|
67
|
def setup_yaml():
|
|
74
|
68
|
""" https://stackoverflow.com/a/8661021 """
|
|
|
@@ -82,14 +76,15 @@ class AkvoYamlNode(yaml.YAMLObject):
|
|
82
|
76
|
self.Akvo_VERSION = version
|
|
83
|
77
|
self.Import = OrderedDict() # {}
|
|
84
|
78
|
self.Processing = [] # OrderedDict()
|
|
85
|
|
- self.Stacking = OrderedDict()
|
|
|
79
|
+ self.Stacking = OrderedDict()
|
|
|
80
|
+ self.META = OrderedDict()
|
|
86
|
81
|
#def __init__(self, node):
|
|
87
|
82
|
# self.Akvo_VERSION = node["version"]
|
|
88
|
83
|
# self.Import = OrderedDict( node["Import"] ) # {}
|
|
89
|
84
|
# self.Processing = OrderedDict( node["Processing"] )
|
|
90
|
85
|
def __repr__(self):
|
|
91
|
|
- return "%s(name=%r, Akvo_VERSION=%r, Import=%r, Processing=%r)" % (
|
|
92
|
|
- self.__class__.__name__, self.Akvo_VERSION, self.Import, self.Processing, self.Stacking )
|
|
|
86
|
+ return "%s(name=%r, Akvo_VERSION=%r, Import=%r, Processing=%r, self.Stacking=%r, self.META=%r)" % (
|
|
|
87
|
+ self.__class__.__name__, self.Akvo_VERSION, self.Import, self.Processing, self.Stacking, self.META )
|
|
93
|
88
|
#self.__class__.__name__, self.Akvo_VERSION, self.Import, OrderedDict(self.Processing) )
|
|
94
|
89
|
|
|
95
|
90
|
try:
|
|
|
@@ -196,6 +191,23 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
196
|
191
|
|
|
197
|
192
|
self.ui.plotGI.setEnabled(False)
|
|
198
|
193
|
self.ui.plotGI.pressed.connect( self.plotGI )
|
|
|
194
|
+
|
|
|
195
|
+ # META
|
|
|
196
|
+ self.ui.locEdit.editingFinished.connect( self.logSite )
|
|
|
197
|
+ self.ui.UTMzone.currentIndexChanged.connect( self.logSite )
|
|
|
198
|
+ self.ui.latBand.currentIndexChanged.connect( self.logSite )
|
|
|
199
|
+ self.ui.ellipsoid.currentIndexChanged.connect( self.logSite )
|
|
|
200
|
+ self.ui.incSpinBox.valueChanged.connect( self.logSite )
|
|
|
201
|
+ self.ui.decSpinBox.valueChanged.connect( self.logSite )
|
|
|
202
|
+ self.ui.intensitySpinBox.valueChanged.connect( self.logSite )
|
|
|
203
|
+ self.ui.tempSpinBox.valueChanged.connect( self.logSite )
|
|
|
204
|
+ self.ui.timeEdit.timeChanged.connect( self.logSite )
|
|
|
205
|
+ self.ui.dateEdit.dateChanged.connect( self.logSite )
|
|
|
206
|
+ # this may call the yaml stuff too often...
|
|
|
207
|
+ self.ui.txtComments.textChanged.connect( self.logSite )
|
|
|
208
|
+
|
|
|
209
|
+ # invert
|
|
|
210
|
+ self.ui.addLoopButton.pressed.connect( self.loopAdd )
|
|
199
|
211
|
|
|
200
|
212
|
# hide header info box
|
|
201
|
213
|
#self.ui.headerFileBox.setVisible(False)
|
|
|
@@ -340,6 +352,29 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
340
|
352
|
else:
|
|
341
|
353
|
self.ui.ProcTabs.removeTab(0)
|
|
342
|
354
|
self.ui.ProcTabs.removeTab(0)
|
|
|
355
|
+
|
|
|
356
|
+ def loopAdd(self):
|
|
|
357
|
+
|
|
|
358
|
+ print(self.ui.loopLabel.text())
|
|
|
359
|
+ print(self.ui.loopGeom.currentText())
|
|
|
360
|
+ print(self.ui.loopType.currentText())
|
|
|
361
|
+
|
|
|
362
|
+ print( "label len", len(self.ui.loopLabel.text()) )
|
|
|
363
|
+ if len(self.ui.loopLabel.text().strip()) == 0:
|
|
|
364
|
+ Error = QtWidgets.QMessageBox()
|
|
|
365
|
+ Error.setWindowTitle("Error!")
|
|
|
366
|
+ Error.setText("Loop label cannot be blank or repeated")
|
|
|
367
|
+ Error.setDetailedText("Each loop label must be unique and comprise at least one character. Leading and trailing whitespace will be trimmed.")
|
|
|
368
|
+ Error.exec_()
|
|
|
369
|
+ else:
|
|
|
370
|
+ if self.ui.loopGeom.currentText() == "Circular":
|
|
|
371
|
+ dialog = QtWidgets.QDialog()
|
|
|
372
|
+ dialog.ui = Ui_circularLoopAdd()
|
|
|
373
|
+ dialog.ui.setupUi(dialog)
|
|
|
374
|
+ dialog.exec_()
|
|
|
375
|
+ dialog.show()
|
|
|
376
|
+ if dialog.result():
|
|
|
377
|
+ print("centre north", dialog.ui.centreNorth.value())
|
|
343
|
378
|
|
|
344
|
379
|
def headerBoxShrink(self):
|
|
345
|
380
|
#self.ui.headerFileBox.setVisible(False)
|
|
|
@@ -396,7 +431,10 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
396
|
431
|
Error.setText("Non-increasing layer detected")
|
|
397
|
432
|
Error.setDetailedText("Each layer interface must be below the one above it.")
|
|
398
|
433
|
Error.exec_()
|
|
399
|
|
-
|
|
|
434
|
+ #err_msg = "Quadrature detection has already been done!"
|
|
|
435
|
+ #reply =QtWidgets.QMessageBox.critical(self, 'Error',
|
|
|
436
|
+ # err_msg)
|
|
|
437
|
+
|
|
400
|
438
|
pCell2 = self.ui.layerTableWidget.item(ii, jj)
|
|
401
|
439
|
pCell2.setText(str(""))
|
|
402
|
440
|
self.ui.layerTableWidget.cellChanged.connect(self.sigmaCellChanged)
|
|
|
@@ -512,6 +550,14 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
512
|
550
|
nor[idx] = list()
|
|
513
|
551
|
eas[idx] = list()
|
|
514
|
552
|
dep[idx] = list()
|
|
|
553
|
+ if jj == 4:
|
|
|
554
|
+ # circular loop
|
|
|
555
|
+ m2pi = np.linspace(0,2*np.pi,10)
|
|
|
556
|
+ rad = 30.
|
|
|
557
|
+ nor[idx] = np.concatenate((np.array(nor[idx]), rad * np.sin(m2pi)))
|
|
|
558
|
+ eas[idx] = np.concatenate((np.array(eas[idx]), rad * np.cos(m2pi)))
|
|
|
559
|
+ dep[idx] = np.concatenate((np.array(dep[idx]), np.ones(len(m2pi))))
|
|
|
560
|
+ print("nor", nor[idx])
|
|
515
|
561
|
if jj == 1:
|
|
516
|
562
|
nor[idx].append( eval(self.ui.loopTableWidget.item(ii, 1).text()) )
|
|
517
|
563
|
elif jj == 2:
|
|
|
@@ -595,7 +641,7 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
595
|
641
|
# make plots as you import the dataset
|
|
596
|
642
|
self.ui.plotImportCheckBox.setEnabled(True)
|
|
597
|
643
|
self.ui.plotImportCheckBox.setChecked(True)
|
|
598
|
|
-
|
|
|
644
|
+
|
|
599
|
645
|
# Update info from the header into the GUI
|
|
600
|
646
|
self.ui.pulseTypeTextBrowser.clear()
|
|
601
|
647
|
self.ui.pulseTypeTextBrowser.append(self.RAWDataProc.pulseType)
|
|
|
@@ -743,7 +789,7 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
743
|
789
|
INFO["transFreq"] = self.RAWDataProc.transFreq
|
|
744
|
790
|
INFO["headerstr"] = str(self.headerstr)
|
|
745
|
791
|
INFO["nDAQVersion"] = self.RAWDataProc.nDAQVersion
|
|
746
|
|
- INFO["log"] = yaml.dump( self.YamlNode ) #self.logText #MAK 20170127
|
|
|
792
|
+ INFO["log"] = yaml.dump( self.YamlNode )
|
|
747
|
793
|
|
|
748
|
794
|
self.RAWDataProc.DATADICT["INFO"] = INFO
|
|
749
|
795
|
|
|
|
@@ -820,9 +866,10 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
820
|
866
|
if AKVO_VERSION[0] >= 1 and AKVO_VERSION[1] >= 2 and AKVO_VERSION[2] >= 3:
|
|
821
|
867
|
self.RAWDataProc.interpulseDelay = self.RAWDataProc.DATADICT["INFO"]["interpulseDelay"]
|
|
822
|
868
|
|
|
823
|
|
- self.YamlNode.Import = OrderedDict((yaml.load( self.logText, Loader=yaml.Loader )).Import)
|
|
|
869
|
+ self.YamlNode.Import = OrderedDict((yaml.load( self.logText, Loader=yaml.Loader )).Import)
|
|
824
|
870
|
self.YamlNode.Processing = list((yaml.load( self.logText, Loader=yaml.Loader )).Processing)
|
|
825
|
871
|
self.YamlNode.Stacking = OrderedDict((yaml.load( self.logText, Loader=yaml.Loader )).Stacking)
|
|
|
872
|
+ self.YamlNode.META = OrderedDict((yaml.load( self.logText, Loader=yaml.Loader )).META)
|
|
826
|
873
|
self.Log()
|
|
827
|
874
|
|
|
828
|
875
|
#self.ui.logTextBrowser.append( yaml.dump(self.YamlNode)) #, default_flow_style=False) )
|
|
|
@@ -857,6 +904,10 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
857
|
904
|
self.ui.lcdNumberFID2Length.setEnabled(1)
|
|
858
|
905
|
self.ui.lcdNumberResampFreq.setEnabled(1)
|
|
859
|
906
|
self.ui.lcdTotalDeadTime.setEnabled(1)
|
|
|
907
|
+
|
|
|
908
|
+ # enable META tab
|
|
|
909
|
+ self.ui.METATab.setEnabled(1)
|
|
|
910
|
+ self.ui.siteBox.setEnabled(1)
|
|
860
|
911
|
|
|
861
|
912
|
#self.ui.lcdTotalDeadTime.display( 1e3*self.RAWDataProc.DATADICT["INFO"]["deadTime"] )
|
|
862
|
913
|
|
|
|
@@ -1006,6 +1057,10 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
1006
|
1057
|
self.YamlNode.Import["instrument dead time"] = (1e-3 * self.ui.DeadTimeSpinBox.value( ))
|
|
1007
|
1058
|
|
|
1008
|
1059
|
self.Log ( )
|
|
|
1060
|
+
|
|
|
1061
|
+ # enable META tab
|
|
|
1062
|
+ self.ui.METATab.setEnabled(1)
|
|
|
1063
|
+ self.ui.siteBox.setEnabled(1)
|
|
1009
|
1064
|
|
|
1010
|
1065
|
# should be already done
|
|
1011
|
1066
|
# QtCore.QObject.connect(self.RAWDataProc, QtCore.SIGNAL("updateProgress(int)"), self.updateProgressBar)
|
|
|
@@ -1244,11 +1299,13 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
1244
|
1299
|
# Log processing
|
|
1245
|
1300
|
Adapt = OrderedDict()
|
|
1246
|
1301
|
Adapt["STEP"] = "TD noise cancellation"
|
|
|
1302
|
+ #print(Adapt)
|
|
1247
|
1303
|
Adapt["n_Taps"] = str(self.ui.MTapsSpinBox.value())
|
|
1248
|
1304
|
Adapt["lambda"] = str(self.ui.adaptLambdaSpinBox.value())
|
|
1249
|
1305
|
Adapt["truncate"] = str(self.ui.adaptTruncateSpinBox.value())
|
|
1250
|
1306
|
Adapt["mu"] = str(self.ui.adaptMuSpinBox.value())
|
|
1251
|
1307
|
Adapt["PCA"] = str(self.ui.PCAComboBox.currentText())
|
|
|
1308
|
+ #print(Adapt)
|
|
1252
|
1309
|
self.YamlNode.Processing.append(Adapt)
|
|
1253
|
1310
|
self.Log( )
|
|
1254
|
1311
|
|
|
|
@@ -1281,6 +1338,22 @@ class ApplicationWindow(QtWidgets.QMainWindow):
|
|
1281
|
1338
|
self.ui.CentralVSpinBox.value(), \
|
|
1282
|
1339
|
self.ui.mplwidget))
|
|
1283
|
1340
|
|
|
|
1341
|
+ def logSite(self):
|
|
|
1342
|
+ self.YamlNode.META["Location"] = self.ui.locEdit.text()
|
|
|
1343
|
+ self.YamlNode.META["Coordinates"] = OrderedDict()
|
|
|
1344
|
+ self.YamlNode.META["Coordinates"]["UTM"] = self.ui.UTMzone.currentText()
|
|
|
1345
|
+ self.YamlNode.META["Coordinates"]["LatBand"] = self.ui.latBand.currentText()
|
|
|
1346
|
+ self.YamlNode.META["Coordinates"]["ellipsoid"] = self.ui.ellipsoid.currentText()
|
|
|
1347
|
+ self.YamlNode.META["DateTime"] = self.ui.dateEdit.date().toString("yyyy-MM-dd") + "T" + str( self.ui.timeEdit.time().toString("hh:mm") )
|
|
|
1348
|
+ self.YamlNode.META["Temp"] = self.ui.tempSpinBox.value()
|
|
|
1349
|
+ self.YamlNode.META["B_0"] = OrderedDict()
|
|
|
1350
|
+ self.YamlNode.META["B_0"]["inc"] = self.ui.incSpinBox.value()
|
|
|
1351
|
+ self.YamlNode.META["B_0"]["dec"] = self.ui.decSpinBox.value()
|
|
|
1352
|
+ self.YamlNode.META["B_0"]["intensity"] = self.ui.intensitySpinBox.value()
|
|
|
1353
|
+ self.YamlNode.META["Field Notes"] = self.ui.txtComments.toPlainText()
|
|
|
1354
|
+
|
|
|
1355
|
+ self.Log()
|
|
|
1356
|
+
|
|
1284
|
1357
|
def bandPassFilter(self):
|
|
1285
|
1358
|
|
|
1286
|
1359
|
self.lock("bandpass filter")
|
Trevor Irons
5 anos atrás