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lemma_mirror
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More work on Python wrapper

iss7
Trevor Irons 5 years ago
parent
a277c26d1f
commit
dd85c872aa
4 changed files with 75 additions and 20 deletions
Split View Show Diff Stats
  1. 1
    0
      Modules/FDEM1D/include/DipoleSource.h
  2. 27
    12
      Modules/FDEM1D/python/pyFDEM1D.cpp
  3. 8
    0
      Modules/LemmaCore/include/RectilinearGridReader.h
  4. 39
    8
      Modules/LemmaCore/python/pyLemmaCore.cpp

+ 1
- 0
Modules/FDEM1D/include/DipoleSource.h View File 

@@ -41,6 +41,7 @@ namespace Lemma {
41 41 
     ///           dipoles.
42 42 
     // ==========================================================================
43 43 
     class DipoleSource : public std::enable_shared_from_this<DipoleSource>,  LemmaObject {
44 
+    //class DipoleSource : public LemmaObject {
44 45
45 46 
         // ====================    FRIENDS     ======================
46 47

+ 27
- 12
Modules/FDEM1D/python/pyFDEM1D.cpp View File 

@@ -31,22 +31,24 @@ PYBIND11_MODULE(FDEM1D, m) {
31 31 
     m.doc() = "Python binding of Lemma::FDEM1D, additional details can be found at https://lemmasoftware.org";
32 32
33 33
34 
-    py::class_<Lemma::WireAntenna, std::shared_ptr<Lemma::WireAntenna> > WireAntenna(m, "WireAntenna"); //, py::dynamic_attr());
34 
+    py::class_<Lemma::WireAntenna, std::shared_ptr<Lemma::WireAntenna> > WireAntenna(m, "WireAntenna");
35 35
36 36 
         // lifecycle
37 37 
         WireAntenna.def(py::init(&Lemma::WireAntenna::NewSP))
38 
-        .def("Serialize", &Lemma::WireAntenna::Print, "YAML representation of the class")
39 38 
         .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::WireAntenna::DeSerialize), "Construct object from yaml representation")
40 39
41 40 
         // print
41 
+        .def("Serialize", &Lemma::WireAntenna::Print, "YAML representation of the class")
42 42 
         .def("__repr__", &Lemma::WireAntenna::Print)
43 43
44 44 
         // modifiers
45 45 
         .def("SetNumberOfPoints", &Lemma::WireAntenna::SetNumberOfPoints, "Sets the number of points comprising the antenna")
46 46 
         .def("SetPoint", py::overload_cast<const int&, const Lemma::Real&, const Lemma::Real&, const Lemma::Real&>(&Lemma::WireAntenna::SetPoint), "Sets a point in the antenna")
47 
-        .def("SetPoint", py::overload_cast<const int&, const Lemma::Vector3r&>(&Lemma::WireAntenna::SetPoint), "Sets a point in the antenna")
47 
+        .def("SetPoint", py::overload_cast<const int&, const Lemma::Vector3r&>(&Lemma::WireAntenna::SetPoint),
48 
+            "Sets a point in the antenna")
48 49 
         .def("SetNumberOfTurns", &Lemma::WireAntenna::SetNumberOfTurns, "Sets the number of turns of the antenna")
49 
-        .def("SetNumberOfFrequencies", &Lemma::WireAntenna::SetNumberOfFrequencies, "Sets the number of frequencies of the transmitter")
50 
+        .def("SetNumberOfFrequencies", &Lemma::WireAntenna::SetNumberOfFrequencies,
51 
+            "Sets the number of frequencies of the transmitter")
50 52 
         .def("SetFrequency", &Lemma::WireAntenna::SetFrequency, "Sets a single frequency of the transmitter")
51 53 
         .def("SetCurrent", &Lemma::WireAntenna::SetCurrent, "Sets the current of the transmitter in amps")
52 54 
 
@@ -54,20 +56,24 @@ PYBIND11_MODULE(FDEM1D, m) {
54 56 
         .def("GetCurrent", &Lemma::WireAntenna::GetCurrent, "Returns the current of the transmitter in amps")
55 57 
         .def("GetPoints", &Lemma::WireAntenna::GetPoints, "Returns the points defining the transmitter")
56 58 
         .def("GetNumberOfDipoles", &Lemma::WireAntenna::GetNumberOfDipoles, "Returns the number of dipoles defining the transmitter")
57 
-        .def("GetNumberOfFrequencies", &Lemma::WireAntenna::GetNumberOfFrequencies, "Returns the number of frequencies for the transmitter")
59 
+        .def("GetNumberOfFrequencies", &Lemma::WireAntenna::GetNumberOfFrequencies,
60 
+            "Returns the number of frequencies for the transmitter")
58 61 
         .def("IsHorizontallyPlanar", &Lemma::WireAntenna::IsHorizontallyPlanar, "Returns true if the transmitter is flat")
59 62 
         .def("GetName", &Lemma::WireAntenna::GetName, "Returns the class name of the object")
60 63
61 64 
         // operations
62 
-        .def("ApproximateWithElectricDipoles", &Lemma::WireAntenna::ApproximateWithElectricDipoles, "Approximates loop with electric dipoles")
65 
+        .def("ApproximateWithElectricDipoles", &Lemma::WireAntenna::ApproximateWithElectricDipoles,
66 
+            "Approximates loop with electric dipoles")
63 67
64 68 
     ;
65 69
66 
-    py::class_<Lemma::PolygonalWireAntenna, std::shared_ptr<Lemma::PolygonalWireAntenna> > PolygonalWireAntenna(m, "PolygonalWireAntenna", WireAntenna); //, py::dynamic_attr())
70 
+    py::class_<Lemma::PolygonalWireAntenna, std::shared_ptr<Lemma::PolygonalWireAntenna> > PolygonalWireAntenna(m,
71 
+            "PolygonalWireAntenna", WireAntenna);
67 72
68 73 
         // lifecycle
69 74 
         PolygonalWireAntenna.def(py::init(&Lemma::PolygonalWireAntenna::NewSP))
70 
-        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::PolygonalWireAntenna::DeSerialize), "Construct object from yaml representation")
75 
+        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::PolygonalWireAntenna::DeSerialize),
76 
+            "Construct object from yaml representation")
71 77
72 78 
         // print
73 79 
         .def("__repr__", &Lemma::PolygonalWireAntenna::Print)
 
@@ -76,14 +82,23 @@ PYBIND11_MODULE(FDEM1D, m) {
76 82 
         // accessors
77 83 
         .def("GetName", &Lemma::PolygonalWireAntenna::GetName, "Returns the name of the class")
78 84
79 
-        // modifiers
80 
-        //.def("SetNumberOfPoints", &Lemma::WireAntenna::SetNumberOfPoints, "Sets the number of points comprising the antenna")
81 
-
82 85 
         // operations
83 
-        .def("ApproximateWithElectricDipoles", &Lemma::PolygonalWireAntenna::ApproximateWithElectricDipoles, "Approximates loop with series of electric dipoles around loop")
86 
+        .def("ApproximateWithElectricDipoles", &Lemma::PolygonalWireAntenna::ApproximateWithElectricDipoles,
87 
+            "Approximates loop with series of electric dipoles around loop")
84 88
85 89 
     ;
86 90
91 
+    //py::class_<Lemma::DipoleSource, std::shared_ptr<Lemma::DipoleSource> > DipoleSource(m, "DipoleSource");
92 
+
93 
+        // lifecycle
94 
+        //DipoleSource.def(py::init(&Lemma::DipoleSource::NewSP))
95 
+        //.def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::DipoleSource::DeSerialize), "Construct object from yaml representation")
96 
+
97 
+        // print
98 
+        //.def("Serialize", &Lemma::DipoleSource::Print, "YAML representation of the class")
99 
+        //.def("__repr__", &Lemma::DipoleSource::Print)
100 
+
101 
+        //;
87 102 
 }
88 103
89 104

+ 8
- 0
Modules/LemmaCore/include/RectilinearGridReader.h View File 

@@ -78,6 +78,14 @@ namespace Lemma {
78 78 
             static std::shared_ptr< RectilinearGridReader >  DeSerialize( const YAML::Node& node );
79 79
80 80 
             /**
81 
+             *   Constructs an object from a string representation of a YAML::Node. This is primarily
82 
+             *   used in Python wrapping
83 
+             */
84 
+            static std::shared_ptr<RectilinearGridReader> DeSerialize( const std::string& node ) {
85 
+                return RectilinearGridReader::DeSerialize(YAML::Load(node));
86 
+            }
87 
+
88 
+            /**
81 89 
              *  Uses YAML to serialize this object.
82 90 
              *  @return a YAML::Node
83 91 
              */

+ 39
- 8
Modules/LemmaCore/python/pyLemmaCore.cpp View File 

@@ -34,7 +34,8 @@ PYBIND11_MODULE(LemmaCore, m) {
34 34
35 35 
         // lifecycle
36 36 
         RectilinearGrid.def(py::init(&Lemma::RectilinearGrid::NewSP))
37 
-        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::RectilinearGrid::DeSerialize), "Construct object from yaml representation")
37 
+        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::RectilinearGrid::DeSerialize),
38 
+            "Construct object from yaml representation")
38 39
39 40 
         // print
40 41 
         .def("__repr__", &Lemma::RectilinearGrid::Print)
 
@@ -58,11 +59,35 @@ PYBIND11_MODULE(LemmaCore, m) {
58 59 
         .def("SetSpacing", &Lemma::RectilinearGrid::SetSpacing, "Sets the grid spacing in x, y, and z")
59 60 
     ;
60 61
62 
+    py::class_<Lemma::RectilinearGridReader, std::shared_ptr<Lemma::RectilinearGridReader> > RectilinearGridReader(m, "RectilinearGridReader");
63 
+
64 
+        // lifecycle
65 
+        RectilinearGridReader.def(py::init(&Lemma::RectilinearGridReader::NewSP))
66 
+        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::RectilinearGridReader::DeSerialize),
67 
+            "Construct object from yaml representation")
68 
+
69 
+        // print
70 
+        .def("__repr__", &Lemma::RectilinearGridReader::Print)
71 
+        .def("Serialize", &Lemma::RectilinearGridReader::Print, "YAML representation of the class")
72 
+
73 
+        // accessors
74 
+        .def("GetName", &Lemma::RectilinearGridReader::GetName, "Returns the name of the class")
75 
+
76 
+        // modifiers
77 
+
78 
+        //methods
79 
+        .def("ReadASCIIGridFile", &Lemma::RectilinearGridReader::ReadASCIIGridFile, "Opens file specified by argument")
80 
+
81 
+        //methods
82 
+        .def("GetGrid", &Lemma::RectilinearGridReader::GetGrid, "Returns the grid object")
83 
+    ;
84 
+
61 85 
     py::class_<Lemma::ASCIIParser, std::shared_ptr<Lemma::ASCIIParser> > ASCIIParser(m, "ASCIIParser");
62 86
63 87 
         // lifecycle
64 88 
         ASCIIParser.def(py::init(&Lemma::ASCIIParser::NewSP))
65 
-        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::ASCIIParser::DeSerialize), "Construct object from yaml representation")
89 
+        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::ASCIIParser::DeSerialize),
90 
+            "Construct object from yaml representation")
66 91
67 92 
         // print
68 93 
         .def("__repr__", &Lemma::ASCIIParser::Print)
 
@@ -90,7 +115,8 @@ PYBIND11_MODULE(LemmaCore, m) {
90 115
91 116 
         // lifecycle
92 117 
         .def(py::init(&Lemma::CubicSplineInterpolator::NewSP))
93 
-        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::CubicSplineInterpolator::DeSerialize), "Construct object from yaml representation")
118 
+        .def_static("DeSerialize", py::overload_cast<const std::string&>(&Lemma::CubicSplineInterpolator::DeSerialize),
119 
+            "Construct object from yaml representation")
94 120
95 121 
         // print
96 122 
         .def("__repr__", &Lemma::CubicSplineInterpolator::Print)
 
@@ -103,14 +129,19 @@ PYBIND11_MODULE(LemmaCore, m) {
103 129
104 130 
         // modifiers
105 131 
         .def("SetKnots", &Lemma::CubicSplineInterpolator::SetKnots, "Sets the knots to use for interpolation")
106 
-        .def("ResetKnotOrdinate", &Lemma::CubicSplineInterpolator::ResetKnotOrdinate, "Resets the knots to use for interpolation, when abscissa values haven't changed")
132 
+        .def("ResetKnotOrdinate", &Lemma::CubicSplineInterpolator::ResetKnotOrdinate,
133 
+            "Resets the knots to use for interpolation, when abscissa values haven't changed")
107 134
108 135 
         // methods
109 136 
         .def("InterpolateOrderedSet", &Lemma::CubicSplineInterpolator::InterpolateOrderedSet, "Interpolate a monotonically increasing ordered set.")
110 
-        .def("Integrate", py::overload_cast<const Lemma::Real&, const Lemma::Real& >(&Lemma::CubicSplineInterpolator::Integrate), "Integrates between the arguments using cubic spline values.")
111 
-        .def("IntegrateN", py::overload_cast<const Lemma::Real&, const Lemma::Real&, const int& >(&Lemma::CubicSplineInterpolator::Integrate), "Integrates the spline from x0 to x1. Uses composite Simpson's rule and n is the number of segments")
112 
-        .def("Interpolate", py::overload_cast<const Lemma::Real& >(&Lemma::CubicSplineInterpolator::Interpolate), "Interpolation at a single point, x is the interpolation abscissa point, returns the ordinate value at x")
113 
-        .def("InterpolateI", py::overload_cast<const Lemma::Real&, int& >(&Lemma::CubicSplineInterpolator::Interpolate), "Interpolation at a single point, x is the interpolation abscissa point and i is the knot to begin searchin at returns the ordinate value at x")
137 
+        .def("Integrate", py::overload_cast<const Lemma::Real&, const Lemma::Real& >(&Lemma::CubicSplineInterpolator::Integrate),
138 
+                "Integrates between the arguments using cubic spline values.")
139 
+        .def("IntegrateN", py::overload_cast<const Lemma::Real&, const Lemma::Real&, const int& >(&Lemma::CubicSplineInterpolator::Integrate),
140 
+                "Integrates the spline from x0 to x1. Uses composite Simpson's rule and n is the number of segments")
141 
+        .def("Interpolate", py::overload_cast<const Lemma::Real& >(&Lemma::CubicSplineInterpolator::Interpolate),
142 
+                "Interpolation at a single point, x is the interpolation abscissa point, returns the ordinate value at x")
143 
+        .def("InterpolateI", py::overload_cast<const Lemma::Real&, int& >(&Lemma::CubicSplineInterpolator::Interpolate),
144 
+                "Interpolation at a single point, x is the interpolation abscissa point and i is the knot to begin searchin at returns the ordinate value at x")
114 145
115 146 
     ;
116 147

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